Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFFPNIDNIIKNYIKEMITHSDIPDLQKQLETAYQVPYSFALGIYISTIESIILNWIDHDFTEEPEEIARYITSVVRI
1VI0 Chain:A ((149-189))
-----------------------------------LDVRLARQMIFGTIDETVTTWVMNDQKYDLVALSNSVLELLVS
General information:
TITO was launched using:
RESULT:
Template:
1VI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20109 for 183 contacts (-109.9/contact) +
2D Compatibility (PS) -4086 + (NN) 261 + (LL) 2716
1D Compatibility (HY) -3600 + (ID) 250
Total energy: -25068.0 ( -136.98 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1VI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VI0-query.scw
PDB file :
Tito_Scwrl_1VI0.pdb
: