Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQLIALDMTDPLSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVF-----------------DYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIGFSTVPMHLNAYLVIADTGIHGHTKEAVDKVKSS----GEAVLPFLKELGYLAEASEDAIHKSDSKQ-------LGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVK---EKREAERLSQQLEREGAVNTWTEKV |
| 1KVK Chain:A ((124-360)) | ---------------------------------------------------------------------RTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKS--INKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQG-KMSSLKRLPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAAHG-LHSKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGCGFDCWETSIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88512 for 1411 contacts (-62.7/contact) +
2D Compatibility (PS) -22795 + (NN) -13830 + (LL) 6032
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -133105.0 ( -94.33 by residue)
QMean score : 0.450
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