Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKTKSFFGHPRGLSTLFFTEMWERFSYYGMRAILLYYMYYSVSQGGLGMDKTVAASIMAVYGSLVYLSSVIGGFVSDRILGSRKTVLYGGILIMLGHIALATPFGQTALFISIALIILGTGLLKPNVSEMVGNLYGENDSRRDAGFSIFVFGINLGAFISPIVVGYLGQEVNFHLGFSLAAIGMFFGLLQYTLDGKKYLTEESLRPNDPLSPEEKSSLYKKVGLILIGIVIVLILLHLMHMLTIEVIIDIFSIIAIAIPIIYFIKILSSKKISSVERSRVWAYIPLFIASILFWSIEEQGSVVLALFADEQTKLYLNFFGHHINFPS---SYFQSMNPLFIMLYVPFFAWLWAKWGSKQPSSPKKFAYGLFFAGASFLWMMLPGLLFGVNAKVSPLWLTMSWAIVIVGEMLISPVGLSATSKLAPKAFQAQMMSIWFLSNAAAQAINAQIVKLYTPD-TQILYYGVVGGITVVFGFILLFYVPRIEKLMSGVK |
| 3WDO Chain:A ((8-382)) | ---------ERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQ-----GASEALIGIAIGIYGLTQAVFQIPFGLLSDRI-GRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGA--IAAAVMALLSDLTREQ--NRTKAMAFIGVSFGITFAIAMVLGPIITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVL-NRE-SGMVK---G--------------------------S------------------------FSK-VLAEPR----LLKLNFGIMCLHMLLMSTFVALPGQLAD-AGFPA--------AEHWKVYLATMLIAFGSVVPFIIYAEVKRKMK-------QVFVFCVGLIVVAEIVLWNAQ--------TQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271307 for 3254 contacts (-83.4/contact) +
2D Compatibility (PS) -37432 + (NN) 959 + (LL) 8976
1D Compatibility (HY) -13200 + (ID) 2500
Total energy: -314504.0 ( -96.65 by residue)
QMean score : 0.273
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