Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSQKVILTNMCLIEDNKGRIVMQIRDPKRYSWSGAALPGGHIEEGESLYDALVREVHEETGLTISNPKLVGMKHWYTDEGI-RYLVFLYKTYDFSGELQSSDEGDVVWIERSQLDKIELAYDMLNLLRVFDEDDISEMFYSKRLEDGFIRKFY
3H95 Chain:A ((26-141))
-----QVGVAGAVFDESTRKILVVQDRNKLKNMWK---FPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQH-----DMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLYGYREGFDKIDLTVEELPAVY
General information:
TITO was launched using:
RESULT:
Template:
3H95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51424 for 765 contacts (-67.2/contact) +
2D Compatibility (PS) -11376 + (NN) -4890 + (LL) 600
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -74090.0 ( -96.85 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3H95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H95-query.scw
PDB file :
Tito_Scwrl_3H95.pdb
: