Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLAVLGTG-MIVKEVLPVLQKIEGIDLVAILSTVRSLETAKDLAKEYNMSLAT----SEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLP----NFDLVKEHLSNLGDIKIVECNYSQYSSRYDAFK----RGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFG-EPITAQYL----PNIERGIDTSGVLVLDYGHFKTVCI--GA--KDCSAEVKSTIQGDKGSIAILGPTNTMPKISLTMNGQESHVYQLNGDRHRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
| 1H6A Chain:A ((87-337)) | ---AIVGLGKYALNQILPGFAGCQHSRIEALVSG--NAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCHYDPMNRAAVKLIREN--QLGKLGMVTTDNSDVMDQNDPAQQWRLRRELA-------GGGSLMDIGIYGLNGTRYLLGEEPIEVRAYTYSDPNDERFVEVEDRIIWQM-RFRSGALSHGASSYSTTTTSRFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSMMPQFIMPANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127625 for 1623 contacts (-78.6/contact) +
2D Compatibility (PS) -24327 + (NN) -7649 + (LL) 944
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -175507.0 ( -108.14 by residue)
QMean score : 0.426
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