Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMALMPYVNED
4DR6 Chain:R ((33-84))
--------------------------DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKL
General information:
TITO was launched using:
RESULT:
Template:
4DR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8702 for 294 contacts (-29.6/contact) +
2D Compatibility (PS) -5499 + (NN) -1593 + (LL) 2248
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -19796.0 ( -67.33 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_4DR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DR6-query.scw
PDB file :
Tito_Scwrl_4DR6.pdb
: