Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MNETLLLHGIQLILIIAMIITFYQIVRHIRSQKINPFKRFFT--GLWIGFVTDALDTLGIGSFA-TTTTFFKLTKLVEDDRKIPATMTAAHVLPVLLQSLCFIFVVKVEALTLITMAGAAFIGAFVGAKMTKNWHAPTVQRILGTLLITAAIIMLYRMITNPGAGI----SDSVHGLHGIWLFVGIVFNFIIGVLMTMGLGNYAPELIFFSLMGLSPAVAMPVMMLDAAMIMTASSTQFIKSGRVNWNGFAGLV-TGGILGVIVAVLFLTNLDLNSLKTLVVGIVLFTGAMLIRSSFKKTMPKSHH |
| 4ZP4 Chain:B ((25-359)) | RRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCSMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSIFDFTH-PCDHEEIRENLT--------LVSTERDFFMRMKCTVTNR-----------GRTVNLKSATWKVLHCTGQVRVLSCLIIMCEPIQHPSHMDIPLDSKTFLSRHSMDMKFTYCDDRILELI------GYHPEEL----LGRS---AYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYVWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEKNDVVFSMDQTE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266434 for 1946 contacts (-136.9/contact) +
2D Compatibility (PS) -27533 + (NN) 2711 + (LL) 3172
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -300484.0 ( -154.41 by residue)
QMean score : 0.166
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