Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIALFAGGDLTYF--E--YDFDYFVGIDRGSLFLLKN------GLSLDMAVGDFDSITEDELLYIKHYCSNIVSASAEKNDTDTELALKTIFKE------FPEAQVTVFGAFGGRIDHMMSNIFLPSDTDLEPFMSQIRLKDEQNIVTYLPSGKNQ-VSRIEGMSYVSFMPE-S-ESTLQISGAKYELNKSNYFKK-KMYSSNEFMTSPIEVELKDGYLIIIYSKDRG |
3S4Y Chain:A ((22-241)) | -KYCLVILNQPLDNYFRHLWNKALLRACADGGANRLYDITEGERESFLPEFINGDFDSIRPEVREYYATKGCELI-STPDQDHTDFTKCLKMLQKKIEEKDLKV-DVIVTLGGLAGRFDQIMASVNTLFQATHITPF-PIIIIQEESLIYLLQPGKHRLHV--MEGDWCGLIPVGQPCMQVTTTGLKWNLTNDVLAFGTLVSTSNTYDG-SGVVTVETDHPLLWTMAIK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76912 for 1498 contacts (-51.3/contact) +
2D Compatibility (PS) -20947 + (NN) -6867 + (LL) 624
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -112152.0 ( -74.87 by residue)
QMean score : 0.376
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