Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKRIWYLIIIITVILGGLAMKNLFATTEASSRKQEQDRVVKYIKQHVELTNGDQIKKVEFIDFQKNEMTGTWGISTKINEQFSISFSEDRIGGKLRALGYQPNEIGFSKDINSNNQNVNDIEVIYMKEE |
| 1Y96 Chain:B ((47-131)) | -----------------------AQESLESQEQRARAALRERYLRSLLAMVG----HQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISYTFKP------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9880 for 459 contacts (21.5/contact) +
2D Compatibility (PS) -8759 + (NN) -1851 + (LL) 3832
1D Compatibility (HY) -800 + (ID) 600
Total energy: 1702.0 ( 3.71 by residue)
QMean score : 0.233
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