Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFYIIDDDPTITMILQDIIEE-DFNNTVVRVNNVSSKAYNELLIADVDIVLIDLLMPILDGVTLVQKIYKQR--SDLKFIMISQVKDNDLRQEAYKAGIEFFINKPINIIEVKSVVKRVTDTIEMQKKLNTIQNLLENTPSYQKPITTSNLTKIRSILSYLGITSETAYTDILNICELLLKQELNFAQFDFQKELSIDEHQQKIILQRIRRAVKKAMINMAHLYIDDFENELTLQYANALFGFQNIHNEAQLIQGKSMYGGKISLKHFFDELILQSKTF
3FFW Chain:A ((5-128))
LKFLVVDDQSTMRRIVRNLLKELGFNNVEEAEDGVD--ALNKLQAGGYGFVISDWKMPNMDGLELLKTIRADGAMSALPVLMVTAYAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLGM----------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FFW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102554 for 944 contacts (-108.6/contact) +
2D Compatibility (PS) -12922 + (NN) -2624 + (LL) 12884
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: -115566.0 ( -122.42 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3FFW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FFW-query.scw
PDB file :
Tito_Scwrl_3FFW.pdb
: