Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAIN--K-NQLFVLRFGIIHCIADSGVYGMLVEFPK----DMDIKDDEWIHIKGTLASEYYQPFKS-TLPVVKVTDWNTIKKPDDPYVYRGF
3KOJ Chain:A ((3-97))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SCILQATVVEAPQLRYAQDNQTPVAEMVVQFPG-APARLKVVGWGAVAQELQDRCRLNDEVVLEGRLRINS------EKQTELTVTRVH--------------


General information:
TITO was launched using:
RESULT:

Template: 3KOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 325 -47359 -145.72 -639.98
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : -145.72
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_3KOJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KOJ-query.scw
PDB file : Tito_Scwrl_3KOJ.pdb: