Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNFITALPIVLLLGFSFVSFMFQFEHLVYFRLALGLFSLVGLYMIYKMKTGIRYFIIYLYASWIVLAAVTAFEEPIFSSFFFGGLVMTMGYLTYMLIYLGMKQDRDANPV
2JSX Chain:A ((1-95))MHT-----------NWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESVRNVE-----GVLAVSLVYHQQEEQGEETPRSHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2JSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 336 -82768 -246.33 -871.24
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -246.33
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_2JSX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JSX-query.scw
PDB file : Tito_Scwrl_2JSX.pdb: