Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKHISMLFVFLMAVMVLSACNSSESSSNSEVSSSKTRTVKHAMGTSDNIPANPKRIVVLTN-EGTEALLALGIKPVGAVKSWKGDPWYDYLKD---------DMKGVKNVGLETEPNVEAIAELKPDLIIGNKVRQEKIYDQLNAIAPTVFAESLAGNWKDNLTLYANAVNKADKGKEVIADFDKRVSDLKNKLGDQTNKTVSVVRFLSGESRIYYTDSFPGIILDQLGFKRPEKQVELFKKQKDQFTFSTDSKESIPDMDADVLFYFTYKAD-NAKENEKWANQWTSSSLWKN-LKAVKSGNAHEVDDVVWTTAGGIKAANYLLDDIETYFLKTK
3BE5 Chain:A ((10-260))-------------------------------------------LGRKVTVPAHPKRIVSLHDLDITIPLIELGVPPVASHGRTRPDGSH-FIRSGALLTGVDFDNSSIAFIG-TADIDIEAIVAAKPDLIITEPTRNTPI-ERLEKIAPTVSIDHLKGGAPEIYRKLAELTGTQSQLAILERRYQAQINALKATL-DSQKITVSVIQANQGKINVMHSYHSLGRVLRDAGFRFPPLIESIPEGGRMDV-----SAERLPELDADFVFA-TWRGDTGGKPQDELATMEKVMPGWCQFLTACRSGR---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3BE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1067 -91271 -85.54 -381.89
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -85.54
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.469

(partial model without unconserved sides chains):
PDB file : Tito_3BE5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BE5-query.scw
PDB file : Tito_Scwrl_3BE5.pdb: