Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASTLTTGLPPGPRLPRYLQSVL-YLRFREWFLPAMHRKYGDVFSLRVPPYADN---LVVYTRPEHIKEIFAADPRSLHAGEGNH-ILGFVMGEHSVLMTDEAEHARMRSLLMPAFTRAALRGYRDMIASVAREHITRWRPHAT----INSLDHMNALTLDIILRVVFGVT--------DPKVKAELTSRLQQIINIHPAILAGVPYPSLKRMNPWKRFFHNQTKIDEILYREIA---SRRIDSDLTARTDVLSRLLQTKDTPTKPLTDAELRDQLITLLLAGHETTAAALSWTLWELAHAPEIQS--QVVWAAVGGDDG-----------FLEAVLKEGMRRHTVIASTARKVTAPAEIGGWRLPAGTVVNTSILLAHASEVSHPKPTEFRPSRFL---DGSVAPNTWLPFGGGVRRCLGFGFALTEGAVILQEIFRRFTITAAGPSKGETPLVRNITTVPKHGAHLRLIPQRRLGGLGDSDPP |
| 1W0G Chain:A ((17-443)) | ----------PGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWG-----FYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM--KSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFV--ENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED-------FLQLMI--------ALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189040 for 2839 contacts (-66.6/contact) +
2D Compatibility (PS) -40072 + (NN) -18314 + (LL) 2504
1D Compatibility (HY) -32000 + (ID) 5300
Total energy: -282222.0 ( -99.41 by residue)
QMean score : 0.418
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