Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDEPTPPEATTPNSESDPRYDSAGVPTFESVREKIETRYGTALGATELDAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTDE
3EFD Chain:K ((129-158))
------------------------------------------------------SEKAAEEAYTRTTRALHERFDRLERMLDDN-
General information:
TITO was launched using:
RESULT:
Template:
3EFD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3587 for 113 contacts (31.7/contact) +
2D Compatibility (PS) -3745 + (NN) -3487 + (LL) 1688
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -3457.0 ( -30.59 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_3EFD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EFD-query.scw
PDB file :
Tito_Scwrl_3EFD.pdb
: