Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MIELSYAPDVAGRRSNWPKGSGVNTWTAIRWTFAEDSPYVGTGLERMASDTHGGGG----GRPVTPPPPGMHHLGCS----RGVLLISSQRDAGHKTCDPAAGGTLTSVLT-------
1E8E Chain:A ((1-124))
DVTNAEKLVYKYTNIAHSANPMYEAPSITDGKIFFNRKFKTPSGKEAACASCHTNNPANVGKNIVTGKEIPPLAPRVNTKRFTDIDKVEDEFTKHCNDILGADCSPSEKANFIAYLLTETKPTK
General information:
TITO was launched using:
RESULT:
Template:
1E8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6353 for 664 contacts (-9.6/contact) +
2D Compatibility (PS) -10919 + (NN) -6312 + (LL) 0
1D Compatibility (HY) -400 + (ID) 600
Total energy: -24584.0 ( -37.02 by residue)
QMean score : -0.006
(partial model without unconserved sides chains):
PDB file :
Tito_1E8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E8E-query.scw
PDB file :
Tito_Scwrl_1E8E.pdb
: