Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MKKMMQGAAALIALVGAGESMALEWMSNSVGFRYGQ--------QFTNPNNPDKFAKRIYSFTHADGYRYGSNFFNLDVFLSD-NRDPRKGTDHGGSEVYAVYRHQLYASRVFDRPLGTGLVKDYAFTLGFDASRNNNLASAKKRALVFGPTLKFNGPGVLDLSLL----YYREKNHFGVPGARHPDHTFDTTYMLNLTWMRPFKVGNHAAKFQGFVNYVGDKGEDYNDKHTAAETLVRTALMVAALPGDKRQPNLWLG----VGYEYWHNKFGVDGGTGSRTSTPTLNMEFTF |
| 1WY5 Chain:A ((1-311)) | MNPESRVIRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLLETSLLFFTRGTGLDGLIGFLPKEEVIRRPLYYVKRSEIEEYAKFKGLRWVEDETNYEVSIPRNRIRHRVIPELKRINENLEDTFLKMVKVLRAEREFLEEEAQKLYKEVKKGNCLDVKKLKEKPLALQRRVIRKFIGEKDYEKVELVRSLLEKGGEVNLGKGKVLKRKERWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2118 for 2011 contacts (1.1/contact) +
2D Compatibility (PS) -27524 + (NN) 5276 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -26430.0 ( -13.14 by residue)
QMean score : -0.043
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