Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPPLLEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKSEIDARVEQALKDVRLADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINLQKDVGITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETIYSFPRSRFVADFIG--QCNLLDATVEAVDGERVRIDLRGLGEVQA---LKSFDAQPGEACVLTLRPEKIRLAQSVTADSDEVHFRGRVAELLYLGDVTLYIVELENGERLETLLPNATPGRAKFFEVGDAVEAAWRFDAGHLVRA |
| 4KHZ Chain:A ((4-314)) | -----VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHL-----LPSDIADVILEGEVQVVEQLGNET----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KHZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170708 for 2257 contacts (-75.6/contact) +
2D Compatibility (PS) -33106 + (NN) -14298 + (LL) 4304
1D Compatibility (HY) -30000 + (ID) 6800
Total energy: -250608.0 ( -111.04 by residue)
QMean score : 0.478
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