Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLIIVSGRSGSGKSTALNVLEDNGFYCIDNLPASLLPDLAQRALLHTELLQPQVAVSIDARNLPSQLQRFPELLQEVRDNHINCDVLYLDADDETLLKRFSETRRRHPLTTDTRSLAEAIGDESQLL-GPIADLADLKLDTTSLNLYQLRDTIKLRLLNKPEPGTAFLVESFGFKRGMPVDADLVFDVRCLPNPYWKPELRDHSGLEP-EVR-EYLAAQPDVEEMYQDIVGYLNKWLPRFAASNRSYVTVAIGCTGGHHRSVYLAERIGAALRDSLKNVQIRHRDLSS |
| 1N1C Chain:A ((4-210)) | --------VDINPARALVYQLLSSLFA--------REVDEQRLKELTSEAAQQFWEQLSLEANFTQSVDKIRSTLNGIKD----------DEALLELAADYCGLFLVGTSASPYASLYLLLFGEQHQQMSEFLHQSKLQVQSH------------------------------------------------------FPEPADH--LAVMLAYMAHLCCHSENSVQLSFLQTCVNSWLAKFINHLTQC--------NKNGFYSAVATLTLAWVKQDIAQLEPAVAIISL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14317 for 1056 contacts (-13.6/contact) +
2D Compatibility (PS) -20924 + (NN) -6411 + (LL) 5548
1D Compatibility (HY) -2400 + (ID) 1400
Total energy: -39904.0 ( -37.79 by residue)
QMean score : 0.408
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