Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNLTLADLQGEIQANVRTALAEDVGGGDLTAQLIDPQREAEARVITREHATIAGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQ------MLFQLKGPARALLTGERSALNFLQLLSGTATRSQHYADLVAGTAVK--LLDTRKTLPGLRLAQKYAVTCGGCHNHRIGLYDAFLIKENHIAACGGIDRAIAEARRIAPGKPVEVEVENL--DELRQALEAGADIVMLDELSLDDMRTAVALTAGRAK---LEASGGINEGTLRNIAETGVDYISIGTLTKDVRAVDLSMRLTL |
| 3C2O Chain:A ((6-292)) | -----LLPVNGAWRQDVTNWLSEDVPSFDFGGYVVGSDLK-EANLYCKQDGMLCGVPFAQEVFNQCE--LQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVC-GFAVKIEVECLSEDEATEAIEAGADVIMLDN------------------HFLLECSGGLN-------LCDDIDIYSTSSIHQGTPVIDFSLKL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -117506 for 1926 contacts (-61.0/contact) +
2D Compatibility (PS) -27301 + (NN) -9070 + (LL) 2312
1D Compatibility (HY) -20800 + (ID) 4600
Total energy: -176965.0 ( -91.88 by residue)
QMean score : 0.434
|
|
|