Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
2HUW Chain:A ((3-103))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVP--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HUW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61484 for 681 contacts (-90.3/contact) +
2D Compatibility (PS) -10974 + (NN) -7666 + (LL) 5740
1D Compatibility (HY) -14000 + (ID) 5000
Total energy: -93384.0 ( -137.13 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_2HUW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HUW-query.scw
PDB file :
Tito_Scwrl_2HUW.pdb
: