Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKCLLLALALTCGAQALIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSAEPEQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
4IB9 Chain:A ((1-162))
----------------LIVTQTMKGLDIQKVAGTWYSLAMAASDISLLDAQSAPLRVYVEELKPTPEGDLEILLQKWENGECAQKKIIAEKTKIPAVFKIDALNENKVLVLDTDYKKYLLFCMENSA--EQSLACQCLVRTPEVDDEALEKFDKALKALPMHIRLSFNPTQLEEQCHI
General information:
TITO was launched using:
RESULT:
Template:
4IB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108967 for 1212 contacts (-89.9/contact) +
2D Compatibility (PS) -16465 + (NN) 1606 + (LL) 1804
1D Compatibility (HY) -24000 + (ID) 8000
Total energy: -154022.0 ( -127.08 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_4IB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IB9-query.scw
PDB file :
Tito_Scwrl_4IB9.pdb
: