Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3CR6 Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIEVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTLELTNDGELILTMTADDVVCTKVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3CR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38987 for 964 contacts (-40.4/contact) +
2D Compatibility (PS) -15330 + (NN) -7731 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -83640.0 ( -86.76 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3CR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CR6-query.scw
PDB file :
Tito_Scwrl_3CR6.pdb
: