Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VRSLNSIVAVCQNMGIGKDGNLPWPPLRNEYKYFQRMTSTSHVEGKQNAVIMGKKTWFSIPEKNRPLKDRINIVLSRELKEAPKGAHYLSKSLDDALALLDSPELKSKVDMVWIVGGTAVYKAAMEKPINHRLFVTRILHEFESDTFFPEIDYKDFKLLTEYPGVPADIQEEDGIQYKFEVYQKSVLAQ
2C2T Chain:A ((1-185))
VGSLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLPEYPGVLSDVQEEKGIKYKFEVYEKN----
General information:
TITO was launched using:
RESULT:
Template:
2C2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118657 for 1370 contacts (-86.6/contact) +
2D Compatibility (PS) -20209 + (NN) -9750 + (LL) 632
1D Compatibility (HY) -24000 + (ID) 6950
Total energy: -178934.0 ( -130.61 by residue)
QMean score : 0.840
(partial model without unconserved sides chains):
PDB file :
Tito_2C2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C2T-query.scw
PDB file :
Tito_Scwrl_2C2T.pdb
: