Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSDMHIQGLQ-----SRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFSQVQVCTAAGLSLGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPATKMETEAHA |
2IT4 Chain:A ((1-256)) | -------------------------------WGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVS-YNPATAKEII--NVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNE-HGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDPSTLLPS-SLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVP--MQHNNRPTQPLKGRTVRASF----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115391 for 2058 contacts (-56.1/contact) +
2D Compatibility (PS) -26888 + (NN) -16788 + (LL) 8016
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -169401.0 ( -82.31 by residue)
QMean score : 0.414
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