Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
2IXC Chain:B ((1-198))
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGE----
General information:
TITO was launched using:
RESULT:
Template:
2IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109058 for 1609 contacts (-67.8/contact) +
2D Compatibility (PS) -21130 + (NN) -9898 + (LL) 188
1D Compatibility (HY) -26800 + (ID) 9900
Total energy: -176598.0 ( -109.76 by residue)
QMean score : 0.882
(partial model without unconserved sides chains):
PDB file :
Tito_2IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IXC-query.scw
PDB file :
Tito_Scwrl_2IXC.pdb
: