Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
3MLB Chain:B ((3-191))
MRKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPH----NITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES
General information:
TITO was launched using:
RESULT:
Template:
3MLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160350 for 1427 contacts (-112.4/contact) +
2D Compatibility (PS) -20532 + (NN) -12255 + (LL) 112
1D Compatibility (HY) -30000 + (ID) 9250
Total energy: -232275.0 ( -162.77 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3MLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MLB-query.scw
PDB file :
Tito_Scwrl_3MLB.pdb
: