Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAGLGHPAAFGRATHAVVRALPESLGQHALRSAKGEEVDVARAERQHQLYVGVLGSKLGLQVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPVADGLHLKSFCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEKLKDHMLIPVSMSELEKVDGLLTCCSVLINKKVDS
2JAJ Chain:B ((5-286))MAGLGHPAAFGRATHAVVRALPESLGQHALRSAK--EVDVARAERQHQLYVGVLGSKLGLQVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTFKDYAVSTVPV---LHLKSFCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAANCIYLNIPNKGHVLLHRTPEEYPESAKVYEKLKDHMLIPVSMSELEKVDGLLTCCSVLINKK---


General information:
TITO was launched using:
RESULT:

Template: 2JAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -205678 for 2425 contacts (-84.8/contact) +
2D Compatibility (PS) -30250 + (NN) -14768 + (LL) -84
1D Compatibility (HY) -38800 + (ID) 13850
Total energy: -303430.0 ( -125.13 by residue)
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_2JAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAJ-query.scw
PDB file : Tito_Scwrl_2JAJ.pdb: