Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA
4KXL Chain:B ((4-144))
----------SVYFCGSIRGGREDQALYARIVSRLRRYGKVLTE----------------GDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYL------------
General information:
TITO was launched using:
RESULT:
Template:
4KXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92144 for 928 contacts (-99.3/contact) +
2D Compatibility (PS) -13874 + (NN) -9177 + (LL) 1776
1D Compatibility (HY) -19200 + (ID) 6200
Total energy: -138819.0 ( -149.59 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_4KXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KXL-query.scw
PDB file :
Tito_Scwrl_4KXL.pdb
: