Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKAKSHAPEVITSSPLK
2J4I Chain:A ((1-234))
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQE--GEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT--------------------
General information:
TITO was launched using:
RESULT:
Template:
2J4I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148132 for 2026 contacts (-73.1/contact) +
2D Compatibility (PS) -25541 + (NN) -10453 + (LL) 784
1D Compatibility (HY) -32000 + (ID) 11600
Total energy: -226942.0 ( -112.01 by residue)
QMean score : 0.728
(partial model without unconserved sides chains):
PDB file :
Tito_2J4I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J4I-query.scw
PDB file :
Tito_Scwrl_2J4I.pdb
: