Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYPLTLEMDLENLEDLFWELDRLDNYNDTSLVENHLCPATEGPLMASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLL-VFILPFAVAEGSVG-WVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRLLSIHITCGTIWLVGFLLALPEILFAKVSQGHHNNSLPRCTFSQENQAETHAWFTSRFLYHVAGFLLPMLVMGWCYVGVVH---RLRQAQRRP--QRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLARLKAVDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKLGCTGPASLCQLFPSWRRSSLSESENATSLTTF |
| 4MQT Chain:A ((36-332)) | ----------------------------------------------KTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSNAAV------TFGTAIAAFYLPVIIMTVLYWHISRASK---------PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCA------PCIPNTVWTIGYWLCYI----NSTINPACYALCNATFKKTFKHLLMC--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252464 for 1974 contacts (-127.9/contact) +
2D Compatibility (PS) -26595 + (NN) -4452 + (LL) 6304
1D Compatibility (HY) -28400 + (ID) 3450
Total energy: -309057.0 ( -156.56 by residue)
QMean score : 0.287
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