Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEHDYHEDYGFSSFNDSSQEEHQDFLQFSKVFLPCMYLVVFVCGLVGNSLVLVISIFYHKLQSL---TDVFL-VNLPLADLVFVCTLPFWAYAGI---HEWVFGQVMCKSLLGIYTINFYTSMLILTCITVDRFIVVVKATKAYNQQAKRMTWGKVTSLLIWVISLLVSLP-------QIIYGNVFNLDKLIC-GYHDEAISTVVLATQMTLGFFLPLLTMIVCYSVIIKTL---LHAGGFQKH--------RSLKIIFLVMAVFLLTQMPFNLMK----FIRSTHWEYYAMTSFHYTIMVTEAIAYLRACLNPVLYAFVSLKFRKNFWKLVKDIGCLPYLGVSHQWKSSEDNSKTFSASHNVEATSMFQL |
| 3ZEV Chain:A ((6-325)) | ---------------PNSDLDVNTDI--YSKVLVTAIYLALFVVGTVGNSVTLFTLARKK---SLQSTVDYYLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVVSLSVELYLAICHPFKAKTLMSRSRTKKFISA--IWLASALLAIPMLFTMGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQVNTFMSFLFPMLVASILNTVIANKLTVMVHQ------PGRVQALRRGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALVYVSAAINPILYNLVSANFRQVF---LSTLAC---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235894 for 1967 contacts (-119.9/contact) +
2D Compatibility (PS) -28191 + (NN) -6284 + (LL) 4080
1D Compatibility (HY) -24400 + (ID) 3850
Total energy: -294539.0 ( -149.74 by residue)
QMean score : 0.235
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