Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESSFSFGVILAVLASLIIATNTLVAVAVLLLIHKNDGVSLCFTLNLAVADTLIGVAISGLLTDQLSSPSRPTQKTLCSLRMAFVTSSAAASVLTVMLITFDRYLAIKQPFRYLKIMSGFVAGACIAGLWLVSYLIGFLPLGIPMFQQT--------AYKGQCSFFAVFHPHFVLTLSCVGFFPAMLLFVFFYCDMLKIASMHSQQIRKM---EHAGAMAGGYRSPRTPSDFKALRTVSVLIGSFALSWTPFLITGIVQVACQEC---HLYLVLERYLWLLGVGNSLLNPLIYAYWQKEVRLQLYHMALGVKKVLTSFLLFLSARNCGPERPRESSCHIVTISSSEFDG |
| 4GBR Chain:A ((9-270)) | -------GIVMSLIVLAIVFGNVLVITAIAKF-ERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFT--NQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEH-----------------KALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLN---W-IGYVNSGFNPLIYCRSPDFRIAFQELLCL---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218846 for 1843 contacts (-118.7/contact) +
2D Compatibility (PS) -25276 + (NN) -10877 + (LL) 5236
1D Compatibility (HY) -30800 + (ID) 3900
Total energy: -284463.0 ( -154.35 by residue)
QMean score : 0.319
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