Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAI----AHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGG---DDEDAPCALEQ-RPDGAPGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPRTTQATHPCDLKGIGL |
2G87 Chain:A ((45-328)) | ----------------------AYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT----GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF------GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVV---HFIIPLIVIFFCY-------GQLVFTVKEAAAQQQESATTQ---------------------------------------KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236441 for 2185 contacts (-108.2/contact) +
2D Compatibility (PS) -28118 + (NN) -14842 + (LL) 3256
1D Compatibility (HY) -7200 + (ID) 900
Total energy: -284245.0 ( -130.09 by residue)
QMean score : 0.291
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