Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANSTGLNASEVAGSLGLILAAVVEVGALLGNGALLVVVLRTPGLRDALYLAHLCVVDLLAAASIMPLGLLAAPPPGLGRVRLGPAPCRAARFLSAALL---PACTLGVAALGLARYRLIVHPLR-----PGSRPPPVLVLTAVWAAAGLLGALSLLGTPPAPPPAPARCSVLAGGLG----------PFRPLWALLAFA---LPALLLLGAYGGIFVVARRAALR-PPRPARGSRLHSDSLDSRLSILPPLRPRLPGGKAALAPALAVGQFAACWLP-YGCACLAPAARAAEAEAAVTWVAYSAF-------AAHPFLYGLLQRPVRLALGRLSRRALPGPVRACTPQAWHPRALLQCLQRPPEGPAVGPSEAPEQTPELAGGRSPAYQGPPESSLS |
| 2YDO Chain:A ((6-304)) | -------------SSVYITVELAIAVLAILGNVLVCWAVWLNSNLQN---VTNYFVVS--AAAADILVGVLAIPF-AIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAIC--WVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES---------------------TLQKEVHAAKSL---AIIVGLFALCWLPLHIINCF--TFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAAENLYF------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168793 for 1827 contacts (-92.4/contact) +
2D Compatibility (PS) -27153 + (NN) -15949 + (LL) 4428
1D Compatibility (HY) -22000 + (ID) 3650
Total energy: -233117.0 ( -127.60 by residue)
QMean score : 0.224
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