Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPGEALLAGLLVMVLAVALLSNALVLLCCAYSAELRTRASGVLLVNLSLGHLLLAALDMPFTLLGVMRGRTPSAPGACQVIGFLDTFLASNAALSVAALSADQWLAVGFPLRYAGRLR-PRYAGLLLGC-------------AW---GQSLAFSGAALGCSWLGYSSAFASCSLRLPPEPERPRFAAFTATLHAVGFVLPLAVLCLTSLQVHRVARRHCQRMDTVTMKALALLADLHPSVRQRCLIQQKRRRHRATRKIGIAIATFLICFAP-YVMTRLAELVPFVTVNAQWGI-LSKCLTYSKAVADPFTYSLLRRPFRQVLAGMVHRLLKRTPRPASTHDSSLDVAGMVHQLLKRTPRPASTHNGSVDTENDSCLQQTH |
| 3PWH Chain:A ((7-305)) | ---SVYITVELAIAVLAI--LGNVLVCWAVWLNSNLQN-VTNYFVVSLAAADILVGVLAIPFAI-TISTGFCAACHG-CLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP--------GCGEGQVACLFED----VVPMNYMVYFNFFACVL------VPLLLMLGVYLRIFAAARRQLKQMESQPL----------PGERARSTLQKEV---HAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158396 for 2010 contacts (-78.8/contact) +
2D Compatibility (PS) -28342 + (NN) -13249 + (LL) 5872
1D Compatibility (HY) -26000 + (ID) 3600
Total energy: -223715.0 ( -111.30 by residue)
QMean score : 0.250
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