Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRHHLQDHFLEIDKKNCCVFRDDFIAKVLPPVLGLEFIFGLLG---NGLALWIFCFHLKSWKSSRIFLFNLAVADFLLIICLPFVMDYYVRRSDWKFGDIPCRLVLFMFAMNRQGSIIFLTVVAVDRYFRVVHP--------HHALNKIS-NWTAAIISCLLWGITVGLTVHLLKKKLLIQNGTANVC-ISFSICHTFRWHEA----MFLLEFFLPLGIILFCSARIIWSLR-----QRQMDRHAKIKRAIT-FIMVVAIVFVICFLPSVVVRIHIFWLLHTSGTQNCEVYRSVDLAFFITLSFTYMNSMLDPVVYYFSSPSFPNFFSTLINRCLQRKITGEPDNNRSTSVELTGDPNKTRGAPEALIANSGEPWSPSYLGPTSNNHSKKGHCHQEPASLEKQLGCCIE |
| 3C9L Chain:A ((45-332)) | -------------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMA-LAC--------AAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIF---THQGSDFGPIFMTIP-AFFAKTSAVY-----NPVIYIMMNKQFRNCMVTTL--CCGKN-----DDE--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152492 for 2299 contacts (-66.3/contact) +
2D Compatibility (PS) -26379 + (NN) -4752 + (LL) 6352
1D Compatibility (HY) -27200 + (ID) 3700
Total energy: -208171.0 ( -90.55 by residue)
QMean score : 0.272
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