Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNPFHASCWNTSAELLNKSWNKEFAYQTASVVDTVILPSMIGIICSTGLVGNILIVFTIIRSRK-KTVPDIYICNLAVADLV-HIVGMPFLIHQWARGGEWVFGGPLCTIITSLDTCNQFACSAIMTVMSVDRYFALVQPFRLTRWRTRYKTIRINLGLWAASFILA-LPVWVY------SKVIKFKDGVESCAFDLTSPDDVLWYTLYLTITTFFFPLPLILVCYILILCYTWEMYQQNKDARCCNPSVPKQRVM---KLTKMVLVLVVVFILSAAPYHVIQLVNLQMEQ--PTLAFYVGYYLSICLSYASSSINPFLYILLSGNFQ---KRLPQIQRRATEKEINNMGNTLKSHF |
| 2Y00 Chain:A ((3-300)) | ------------AELLSQQWEAGMSLLMALVVLLIV-------------AGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG-TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRA-----YAIASSIISFY--IPLLIMIFVALRVYREAKEQ------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNW----LGYANSAMNPIIYC-RSPDFRKAFKRLLA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214627 for 1895 contacts (-113.3/contact) +
2D Compatibility (PS) -26890 + (NN) -1970 + (LL) 3712
1D Compatibility (HY) -28400 + (ID) 4100
Total energy: -272275.0 ( -143.68 by residue)
QMean score : 0.292
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