Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHQNHTFSSDFILLGLFSSSPTSVVFFLVLFVIFIMSVTENTLMILLIRSDSRLHTPMYFLLSHLSLMDILHVSNIVPKMVTNFLSGSRTISFAGCGFQVFLSLTLLGGECLL--LAAMSCDRYVAICHPLRYPILMKEYASALMAGGSWLIGVFNSTVHTAYALQFPFCGSRAIDHFFCEVPAMLKLSCA-------DTTRYERGVCVSAVIFLLIPFSLISASYGQIILTV----LQMKSSEARKKSFSTCSFHMIVVTM--------YYGPFIFTYMRPKSYHTPGQDKFLAI--FYTILTPTLNPFIYSFRNKDVLAVMKNMLKSNFLHKKMNRKIPECVFCLFLC |
3DQB Chain:A ((44-312)) | ------------------------------MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFA--TLGGEIALWSLVVLAIERYVVVCKPMSN-FRFGENHAIMGVAFTWVMAL--------------ACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP---IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185503 for 1798 contacts (-103.2/contact) +
2D Compatibility (PS) -25056 + (NN) -4556 + (LL) 4772
1D Compatibility (HY) -24000 + (ID) 3050
Total energy: -237393.0 ( -132.03 by residue)
QMean score : 0.204
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