Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCSGNQTSQNQTASTDFTLTGLFAESKHAALLYTVTFLLFLMALTGNALLILLIHSEPRLHTPMYFFISQLALMDLMYLCVTVPKMLVGQVTGDDTISPSGCGIQMFFHLTLAGA-EVFLLAAMAYDRYAAVCRPL-HYPLLMNQRVCQLLVSACWVLGMVDGLLLTPITMSFPFCQSRKILSFFCETPALLKLSCS--------DVSLYKMLTYLCCILMLLTPIMVISSSYTLILHLIH----RMNSAAGRRKALATCSSHMIIVLLLF--------GASFYTYMLRSSYHTAEQDMMVSAFYTIFTPVLNPLIYSLRNKDVTRALRSMMQSRMNQEK |
| 1L9H Chain:A ((35-313)) | -----------------------AEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF-ATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAI--MGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYM-FVVHFIIPLIVIFFCYGQLVFTVKEAAA-----ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS-DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239634 for 2002 contacts (-119.7/contact) +
2D Compatibility (PS) -25703 + (NN) -5095 + (LL) 2444
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -274388.0 ( -137.06 by residue)
QMean score : 0.197
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