Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWPNITAAPFLLTGFPGLEAAHHWISIPFFAVYVCILLGNGMLLYLIKHDHSLHEPMYYFLTMLAGTDLMVTLTTMP-----TVMGI-LWVNHREISSVGCFLQAYF--IHSLSVVES-GSLLAMAYDCFIAIRNPLRYASILTNTRVIALGVGVF-LRGFVSILPVILRLFSFSYCKSHVITRAFCLHQEIMRLACADITFNRLYPVILISLTIFLDCLIILFSYILILNTV-----IGIASGEERA------KALNTCISHISCVLIFYVTVMGLTFIYRFGKN-VPEVVHIIMSYIYFLFPPLMNPVIYSIKTKQIQYGIIRLLSKHRFSS |
| 2YCY Chain:A ((21-299)) | -------------------------------VVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLW---------GSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWW------RDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR-DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYA-NSAMNPIIYC-RSPDFRKAFKRLLAF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244750 for 1835 contacts (-133.4/contact) +
2D Compatibility (PS) -25564 + (NN) -1608 + (LL) 4424
1D Compatibility (HY) -28000 + (ID) 3450
Total energy: -298948.0 ( -162.91 by residue)
QMean score : 0.208
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