Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLGVTLTTMP----TVLGVLWLDHREIGHGACFSQAYF-IHTLSVMES-GVLLAMAYDCFITIRSPLRYTSILTNTQVMKIGVRVLTRAGL-SIMPIVVRLHWFPYCRSHVLSHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKT----VMGIGSGGERA--------KALNTC-----VSHICCILVFYVTVVCLTFIHRFGKH-VPHVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA |
| 2YCX Chain:A ((25-294)) | -----------------------------------IVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWL------WGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIM--MHWW----RDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIV-----NVFNRDLVPDWLFVAFNWLGYANSA-MNPIIYC-RSPDFRKAFK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212243 for 1717 contacts (-123.6/contact) +
2D Compatibility (PS) -24644 + (NN) -3741 + (LL) 5216
1D Compatibility (HY) -26000 + (ID) 3400
Total energy: -264812.0 ( -154.23 by residue)
QMean score : 0.128
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