Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPAPSAGAELQPPLFANASDAYPSACPSAGANASGPPG-ARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADA-LATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINIC-IWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPS-PSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGS----KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIA-LGYANSSLNPVLYAFLDENFKRCFRQLCRKPCGRPDPSSFSRAREATARERVTACTPSDGPGGGAAA |
| 2KSB Chain:A ((13-321)) | ---------------------------PNISTNTSEPNQFVQPAWQIVLW---AAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQP---RLSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLL-PYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVSRLETTIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243728 for 2349 contacts (-103.8/contact) +
2D Compatibility (PS) -31155 + (NN) -17354 + (LL) 2004
1D Compatibility (HY) -36000 + (ID) 4500
Total energy: -330733.0 ( -140.80 by residue)
QMean score : 0.295
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