Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGDNQSENSQFLLLGISESPEQQRILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQ---NKAISYAGCLTQLYFLVSL--VTLDNLILAVMAYDRYVATCCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTPLGFMTTSYVRIVRT----ILQMPSASKK--------YKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVL---TPMMNPFIYRLRNKDMHGAPGRVLWRPFQRPK |
2YCY Chain:A ((23-297)) | -----------------------------------LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADL-----VVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISA----LVSFLPIMMHWWRDEDPQALKCYQDP----GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR--DRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIY-CRSPDFRKAFKRLLAF------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217773 for 1810 contacts (-120.3/contact) +
2D Compatibility (PS) -24726 + (NN) 91 + (LL) 4792
1D Compatibility (HY) -23200 + (ID) 3500
Total energy: -264316.0 ( -146.03 by residue)
QMean score : 0.220
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