Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSDNHSFLGDSPKAFILLGVSDRPWLELPLFVVLLLSYVLAMLGNVAIILASRVDPQLHSPMYIFLSHLSFLDLCYTTTTVP--QMLVNMGSSQKTISYGGCTVQ-YAVFHWLGCTECI-VLAAMALDRYVAICKPLHYAVLMHRALCQQLVALAWLSGFGNSFVQVVLTVQLPFCGRQVLNNFFCEVPAVIKL----SCADTAVND--TILAVLVAFFV--LVPLALILLSYGFIARAVLRIQSSKGR--------HKAFGTCSSHLMIVSLFYLPAIYMYLQPPSSYSQE---QGKFISLFY-SIITPTLNPFTYTLRNKDMKGALRRLLARIWRLCG |
| 2Y02 Chain:A ((11-300)) | ---------------------------EAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG----TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPI------------MMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ----------SRVMLMREHKALKTLGIIMGVFTLCWLP--FFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225776 for 1823 contacts (-123.8/contact) +
2D Compatibility (PS) -25864 + (NN) -9444 + (LL) 4104
1D Compatibility (HY) -23600 + (ID) 3400
Total energy: -283980.0 ( -155.78 by residue)
QMean score : 0.268
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