Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLQKLMEPEAGTNRTAVAEFILLGLVQTEEMQPVVFVLLLFAYLVTTGGNLSILAAVLVEPKLHAPMYFFLGNLSVLDVGCITVTVPAMLGRLLSHKSTISYDACLSQLFFFHLLAGMDCFLLTA-------MAYDRLLAICQPLTYSTRMSQTVQRMLVAASLACAFTNALTHTVAMSTLNFCGPNEVNHFYCDLPQLFQL----SCSSTQLNELLLFAVGFIMAGTPLVLII----TAYSHVAAAVLRIRSVEGRK---------KAFSTCGSHLTVVCL----FFGRGIFNYMRLGSEEASDKDKGVGVFNTV--INPMLNPLIYSLRNPDVQGALWQIFLGRRSLT |
| 4AMJ Chain:A ((7-294)) | ----------------------------SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELW-----TSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICT------------VWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF----NRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AMJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143045 for 1680 contacts (-85.1/contact) +
2D Compatibility (PS) -24576 + (NN) -8079 + (LL) 6948
1D Compatibility (HY) -23600 + (ID) 3250
Total energy: -195602.0 ( -116.43 by residue)
QMean score : 0.129
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