Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPENDTGISEFVLLGLSEEPEL---QPFLFGLFLS-MYLVTVLG---NLLIILATISDSHLHTPMYFFLSNLSFADICFISTTIPKMLINIQTQSRVITYAGCITQMCFFVLFGGLDSLLLAVMAYDRFVAICHPL-HYTVIMNPRLCGLLVLASWMIAALNSLSQSLMVLWLSF------CT---DLEIPHFFCELNQVIHLACSDTFLNDMGMYFAAGLLAGGPLVGILCSYSKIVSSIRAISSAQGKYKAFSTCASHLS------VVSLFCC----TGLGVYL-TSAATHNSHTSATASVMYTVATPMLNPFIYSLRNKDIKRALKMSFRGKQ |
| 3CAP Chain:A ((15-317)) | ----NKTG----VVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG--VAFTWVMAL--ACAAPPLVGWSRYIPEGMQCSCGIDYYTPH--EETN-------NESFVIYM---FVVHFII--PLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193516 for 1941 contacts (-99.7/contact) +
2D Compatibility (PS) -27802 + (NN) -2664 + (LL) 2120
1D Compatibility (HY) -28000 + (ID) 3550
Total energy: -253412.0 ( -130.56 by residue)
QMean score : 0.137
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