Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPSATPGAQMGVPPGSREPSPVPPDYEDEFLRYLWRDYLYPKQYE--WVLIAAYVAVFVVALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLVDITESWLFGHALCKVIPYLQAVSVSVAVLTLSFIALDRWYAICHPLLFKSTARRARGSIL--GIWAVSLAIMVPQAAVMECSSVLPELANRTR------LFSVCDERWADDLYPKIYHSCFFIVTYLAPLGLMAMAYFQIFRKLWGRQIPGTTSALVRNWKRPSDQLGDLEQGLSGEPQPRARAFLAEVKQMRARRKTAKMLMVVLLVFALCYLPISVLNVLKRVFGMFRQASDREAVYACFTFSHWLVYANSAANPIIYNFLSGKFREQFKAAFSCCLPGLGPCGSLKAPSPRSSASHKSLSLQSRCSISKISEHVVLTSVTTVLP |
| 2YCX Chain:A ((9-294)) | -------------------------------------------QWEAGMSLLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALV-----------SFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYRE-------------------AKEQIRKIDRA-----SKRKRVML-----MR-EHKALKTLGIIMGVFTLCWLPFFLVNIV----NVFNRDLVPDWLFVAF---NWLGYANSAMNPIIYC-RSPDFRKAFK------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226348 for 2052 contacts (-110.3/contact) +
2D Compatibility (PS) -28736 + (NN) -12816 + (LL) 8008
1D Compatibility (HY) -32400 + (ID) 4650
Total energy: -296942.0 ( -144.71 by residue)
QMean score : 0.315
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