Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGTKLEDSPPCRNWSSASELNETQEPFLNPTDYDDEEFLRYLWREYLHPKEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVI--IWIVSCIIMI------------PQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKPLQPVSQPRGPGQPTKSRMSAVAAEIKQIRARRKTARMLMIVLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAW-FTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSCCCLGVHHRQEDRLTRGRTSTESRKSLTTQISNFDNISKLSEQVVLTSISTLPAANGAGPLQNW |
| 2YCZ Chain:A ((16-294)) | --------------------------------------------------------LLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA--LKCYQD-PGCCDFVT--------------NRAYAIASSIISFYIPLLIMIFVALRVYR---------------------EAKEQIRKIDRASKRKRVMLMRE-------HKALKTLGIIMGVFTLCWLPFFLVNIV--------NVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAF--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222230 for 1929 contacts (-115.2/contact) +
2D Compatibility (PS) -27105 + (NN) -6846 + (LL) 11768
1D Compatibility (HY) -30000 + (ID) 4550
Total energy: -278963.0 ( -144.62 by residue)
QMean score : 0.244
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