Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGPRRLLLVAACFSLCGPLLSARTRARRPESKATNATLDPRSFLLRNPNDKYEPFWEDEEKNESGLTEYRLVSINKSSPLQKQLPAFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLNITTCHDVLNETLLEGYYAYYFSAFSAVF--------FFVPLIISTVCYVSIIRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNV-LLIAHYSFLSHTSTT----EAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSDPSSYNSSGQLMASKMDTCSSNLNNSIYKKLLT |
| 4XT1 Chain:A ((43-314)) | ----------------------------------------------------------------------------------------------------VTLFL---YGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-------SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY----MRYRPVKQACLFSIFWWIFAV-----------IIAIPHFMVVTKKD--NQCMTD--YDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIV---AVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274630 for 1835 contacts (-149.7/contact) +
2D Compatibility (PS) -25555 + (NN) -1530 + (LL) 7800
1D Compatibility (HY) -38000 + (ID) 3750
Total energy: -335665.0 ( -182.92 by residue)
QMean score : 0.234
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